addStates               Adds a bar representing state sequence.
dmvnorm.hsmm            Emission ensity function for a multivariate
                        normal emission distribution
dnorm.hsmm              Emission density function for normal emission
                        distribution
dpois.hsmm              Emission density function for Poisson emission
                        distribution
gammafit                Parameter estimation for the Gamma distribution
hmmfit                  fit a hidden Markov model
hmmspec                 Specificatin of HMMs
hsmmfit                 fit a hidden semi-Markov model
hsmmspec                Hidden semi-Markov model specification
mstep.mvnorm            Performs re-estimation (the M-step) for a
                        multivariate normal emission distribution
mstep.norm              Performs re-estimation (the M-step) for a
                        normal emission distribution
mstep.pois              Performs re-estimation (the M-step) for a
                        Poisson emission distribution
plot.hsmm               Plot function for hsmms
plot.hsmm.data          Plot function for hsmm data
predict.hmm             Prediction function for hmm
predict.hmmspec         Prediction function for hmmspec
predict.hsmm            Prediction for hsmms
predict.hsmmspec        Prediction for hsmmspec
print.hmm               Print method for hmm objects
print.hmmspec           Print function for hmmspec
print.hsmmspec          Print function for hsmmspec
reproai                 Artificial insemination times for seven cows
reprocows               Reproductive data from seven dairy cows
reproppa                Observed lengths of post-partum anoestrus for
                        73 dairy cows
rmvnorm.hsmm            Random number generation from a multivariate
                        normal distributed emission distribution
rnorm.hsmm              Random number generation from a normally
                        distributed emission distribution
rpois.hsmm              Random number generation from a Poisson
                        distributed emission distribution
sim.mc                  Markov chain simulation
simulate.hmmspec        Simulation of hidden Markov models
simulate.hsmmspec       Simulation for HSMMs
smooth.discrete         Smoothing a discrete time series.
summary.hmm             Summary method for hmm objects
summary.hsmm            Summary function for hsmm
