add_rcrd_log            Log files added to the SQL database in the
                        restez path
cat_line                Cat lines
char                    Print green
check_connection        Helper function to test if a stable internet
                        connection can be established.
cleanup                 Clean up test data
connected               Is restez connected?
connection_get          Retrieve restez connection
count_db_ids            Return the number of ids
db_create               Create new NCBI database
db_delete               Delete database
db_download             Download database
db_download_intern      Download database (internal version)
db_sqlngths_get         Return the minimum and maximum sequence lengths
                        in db
db_sqlngths_log         Log the min and max sequence lengths
demo_db_create          Create demo database
dir_size                Calculate the size of a directory
dwnld_path_get          Get dwnld path
dwnld_rcrd_log          Log a downloaded file in the restez path
entrez_fasta_get        Get Entrez fasta
entrez_fetch            Entrez fetch
entrez_gb_get           Get Entrez GenBank record
extract_accession       Extract accession
extract_by_patterns     Extract by keyword
extract_clean_sequence
                        Extract clean sequence from sequence part
extract_definition      Extract definition
extract_features        Extract features
extract_inforecpart     Extract the information record part
extract_keywords        Extract keywords
extract_locus           Extract locus
extract_organism        Extract organism
extract_seqrecpart      Extract the sequence record part
extract_sequence        Extract sequence
extract_version         Extract version
file_download           Download a file
filename_log            Write filenames to log files
flatfile_read           Read flatfile sequence records
gb_build                Read and add .seq files to database
gb_definition_get       Get definition from GenBank
gb_df_create            Create GenBank data.frame
gb_df_generate          Generate GenBank records data.frame
gb_extract              Extract elements of a GenBank record
gb_fasta_get            Get fasta from GenBank
gb_organism_get         Get organism from GenBank
gb_record_get           Get record from GenBank
gb_sequence_get         Get sequence from GenBank
gb_sql_add              Add to GenBank SQL database
gb_sql_query            Query the GenBank SQL
gb_version_get          Get version from GenBank
gbrelease_check         Check if the last GenBank release number is the
                        latest
gbrelease_get           Get the GenBank release number in the restez
                        path
gbrelease_log           Log the GenBank release number in the restez
                        path
has_data                Does the connected database have data?
identify_downloadable_files
                        Identify downloadable files
is_in_db                Is in db
last_add_get            Return date and time of the last added sequence
last_dwnld_get          Return date and time of the last download
last_entry_get          Return the last entry
latest_genbank_release
                        Retrieve latest GenBank release number
latest_genbank_release_notes
                        Download the latest GenBank Release Notes
list_db_ids             List database IDs
message_missing         Produce message of missing IDs
mock_def                Mock def
mock_gb_df_generate     Generate mock GenBank records data.frame
mock_org                Mock org
mock_rec                Mock rec
mock_seq                Mock seq
ncbi_acc_get            Get accession numbers by querying NCBI GenBank
predict_datasizes       Print file size predictions to screen
print.status            Print method for status class
readme_log              Create README in restez_path
record                  Example GenBank record
restez_connect          Connect to the restez database
restez_disconnect       Disconnect from restez database
restez_path_check       Check restez filepath
restez_path_get         Get restez path
restez_path_set         Set restez path
restez_path_unset       Unset restez path
restez_ready            Is restez ready?
restez_rl               Restez readline
restez_status           Check restez status
search_gz               Scan a gzipped file for text
seshinfo_log            Log the system session information in restez
                        path
setup                   Set up test common test data
slctn_get               Retrieve GenBank selections made by user
slctn_log               Log the GenBank selection made by a user
sql_path_get            Get SQL path
stat                    Print blue
status_class            Generate a list class for storing status
                        information
testdatadir_get         Get test data directory
