# Generated by roxygen2: do not edit by hand

S3method("[",sparsebnPath)
S3method(as.data.frame,sparsebnData)
S3method(as.list,edgeList)
S3method(as.list,sparse)
S3method(as.list,sparsebnFit)
S3method(as.list,sparsebnPath)
S3method(as.matrix,edgeList)
S3method(as.matrix,sparse)
S3method(coerce_discrete,character)
S3method(coerce_discrete,data.frame)
S3method(coerce_discrete,factor)
S3method(coerce_discrete,integer)
S3method(coerce_discrete,numeric)
S3method(coerce_discrete,sparsebnData)
S3method(edgeList,Matrix)
S3method(edgeList,bn)
S3method(edgeList,graphNEL)
S3method(edgeList,igraph)
S3method(edgeList,list)
S3method(edgeList,matrix)
S3method(edgeList,network)
S3method(edgeList,sparse)
S3method(estimate.parameters,edgeList)
S3method(estimate.parameters,sparsebnFit)
S3method(estimate.parameters,sparsebnPath)
S3method(get.adjacency.matrix,edgeList)
S3method(get.adjacency.matrix,sparsebnFit)
S3method(get.adjacency.matrix,sparsebnPath)
S3method(get.covariance,edgeList)
S3method(get.covariance,sparsebnFit)
S3method(get.covariance,sparsebnPath)
S3method(get.lambdas,sparsebnPath)
S3method(get.nodes,sparsebnFit)
S3method(get.nodes,sparsebnPath)
S3method(get.precision,sparsebnFit)
S3method(get.precision,sparsebnPath)
S3method(is.zero,edgeList)
S3method(is.zero,sparse)
S3method(num.edges,edgeList)
S3method(num.edges,sparse)
S3method(num.edges,sparsebnFit)
S3method(num.edges,sparsebnPath)
S3method(num.nodes,edgeList)
S3method(num.nodes,sparse)
S3method(num.nodes,sparsebnFit)
S3method(num.nodes,sparsebnPath)
S3method(num.samples,sparsebnData)
S3method(num.samples,sparsebnFit)
S3method(num.samples,sparsebnPath)
S3method(openCytoscape,default)
S3method(openCytoscape,sparsebnFit)
S3method(openCytoscape,sparsebnPath)
S3method(pick_family,sparsebnData)
S3method(plot,edgeList)
S3method(plot,sparsebnData)
S3method(plot,sparsebnFit)
S3method(plot,sparsebnPath)
S3method(print,edgeList)
S3method(print,sparse)
S3method(print,sparsebnData)
S3method(print,sparsebnFit)
S3method(print,sparsebnPath)
S3method(reIndexC,sparse)
S3method(reIndexR,sparse)
S3method(sparse,Matrix)
S3method(sparse,edgeList)
S3method(sparse,list)
S3method(sparse,matrix)
S3method(sparsebnData,data.frame)
S3method(sparsebnData,list)
S3method(sparsebnData,matrix)
S3method(sparsebnFit,list)
S3method(sparsebnPath,list)
S3method(summary,edgeList)
S3method(summary,sparsebnData)
S3method(summary,sparsebnFit)
S3method(summary,sparsebnPath)
S3method(t,sparse)
S3method(to_bn,bn)
S3method(to_bn,edgeList)
S3method(to_bn,graphNEL)
S3method(to_bn,igraph)
S3method(to_bn,network)
S3method(to_bn,sparsebnFit)
S3method(to_bn,sparsebnPath)
S3method(to_edgeList,bn)
S3method(to_edgeList,edgeList)
S3method(to_edgeList,graph)
S3method(to_edgeList,igraph)
S3method(to_edgeList,network)
S3method(to_edgeList,sparsebnFit)
S3method(to_edgeList,sparsebnPath)
S3method(to_graphNEL,bn)
S3method(to_graphNEL,edgeList)
S3method(to_graphNEL,graphNEL)
S3method(to_graphNEL,igraph)
S3method(to_graphNEL,network)
S3method(to_graphNEL,sparsebnFit)
S3method(to_graphNEL,sparsebnPath)
S3method(to_igraph,bn)
S3method(to_igraph,edgeList)
S3method(to_igraph,graphNEL)
S3method(to_igraph,igraph)
S3method(to_igraph,network)
S3method(to_igraph,sparsebnFit)
S3method(to_igraph,sparsebnPath)
S3method(to_network,bn)
S3method(to_network,edgeList)
S3method(to_network,graphNEL)
S3method(to_network,igraph)
S3method(to_network,network)
S3method(to_network,sparsebnFit)
S3method(to_network,sparsebnPath)
export(alg_input_data_frame)
export(as.edgeList)
export(as.sparse)
export(auto_count_levels)
export(auto_generate_levels)
export(capitalize)
export(check_if_complete_data)
export(check_if_data_matrix)
export(check_if_matrix)
export(check_if_numeric_data)
export(check_list_class)
export(check_list_names)
export(check_list_numeric)
export(check_na)
export(check_null)
export(coerce_discrete)
export(col_classes)
export(convert_factor_to_discrete)
export(cor_vector_ivn)
export(count.interventions)
export(count.levels)
export(count_nas)
export(dag_summary)
export(data_not_numeric)
export(default_alpha)
export(default_max_iters)
export(degrees)
export(edgeList)
export(empty_dag_summary)
export(estimate.parameters)
export(feature_not_supported)
export(fit_glm_dag)
export(fit_multinom_dag)
export(generate.lambdas)
export(get.adjacency.matrix)
export(get.covariance)
export(get.lambdas)
export(get.nodes)
export(get.precision)
export(get.solution)
export(getGraphPackage)
export(getPlotPackage)
export(global_coerce_warning)
export(has_missing_values)
export(input_not_sparsebnData)
export(invalid_class)
export(invalid_pkg_specification)
export(invalid_type_input)
export(is.edgeList)
export(is.obs)
export(is.sparse)
export(is.sparsebnData)
export(is.sparsebnFit)
export(is.sparsebnPath)
export(is.zero)
export(list_classes)
export(num.edges)
export(num.nodes)
export(num.samples)
export(openCytoscape)
export(permute.nodes)
export(pick_family)
export(pkg_not_installed)
export(pmatch_numeric)
export(random.dag)
export(random.graph)
export(random.spd)
export(reIndexC)
export(reIndexR)
export(recode_levels)
export(resetGraphPackage)
export(select)
export(select.parameter)
export(setGraphPackage)
export(setPlotPackage)
export(show.parents)
export(sparse)
export(sparsebnData)
export(sparsebnFit)
export(sparsebnPath)
export(specify.prior)
export(to_bn)
export(to_edgeList)
export(to_graphNEL)
export(to_igraph)
export(to_network)
export(zero_threshold)
importFrom(grDevices,dev.off)
importFrom(grDevices,n2mfrow)
importFrom(graphics,par)
importFrom(graphics,plot)
importFrom(graphics,title)
importFrom(methods,as)
importFrom(utils,capture.output)
