Package: CellDEEP
Type: Package
Title: Cell DiffErential Expression by Pooling ('CellDEEP')
Version: 1.0.1
Authors@R: person("Yiyi", "Cheng", email = "2593244c@student.gla.ac.uk",role = c("aut", "cre"), comment = c(ORCID = "0009-0005-3329-6842"))
Description: Pool cells together before running differentially expression (DE) analysis. 
 Tell 'CellDEEP' how many cells you want to pool together (which shall be determined 
 by the overall cell number of data), then run DE analysis.
 Cheng et al. (2026) <doi:10.64898/2026.03.09.710522>.
License: GPL (>= 3)
Encoding: UTF-8
LazyData: true
RoxygenNote: 7.3.2
Imports: Seurat
Suggests: knitr, rmarkdown, testthat (>= 3.2.3)
Config/testthat/edition: 3
VignetteBuilder: knitr
Depends: R (>= 3.5)
NeedsCompilation: no
Packaged: 2026-03-24 16:10:07 UTC; andrewmccluskey
Author: Yiyi Cheng [aut, cre] (ORCID: <https://orcid.org/0009-0005-3329-6842>)
Maintainer: Yiyi Cheng <2593244c@student.gla.ac.uk>
Repository: CRAN
Date/Publication: 2026-03-29 15:30:02 UTC
Built: R 4.5.3; ; 2026-06-08 05:07:31 UTC; windows
