7d9dd95fafc31b20e5beba277b89e1a6 *DESCRIPTION
3505f6e1fde1984a150aabe135ceb26a *NAMESPACE
ea8fc73a707cddcefc34c54b4bf459d6 *R/RaceID.R
7370e37a198353c878ecf36dce9e990d *R/RaceID_utils.R
28cf7496d8bd5364baf0a40f65db6b0e *R/RcppExports.R
876cb952aeff01ff9cea8187d9ca27cf *R/StemID.R
aca47f639f51fff2421ba2aa4830fb17 *R/StemID_utils.R
84af23e8df8c850ef2b53061ef22452f *R/VarID_functions.R
dc83150e3c05abcb05942901608ed62a *R/cc_genes.R
a3e188523f3e981d2304135e35e68156 *R/intestinalData.R
dff1f5d97012e78fb564cbecf1c41c76 *R/intestinalDataSmall.R
0fd109213ef7aa92c36b8e445b9754f7 *build/vignette.rds
5a2ef59b1e738f47786e5a78df88d6ef *data/cc_genes.RData
39f7e3b97402ff294717f7d24e8beabd *data/intestinalData.RData
03c745aeef55de08b911eb00b3cc6ee7 *data/intestinalDataSmall.RData
5c0cc41fea0bbc399f162acef4cf5e61 *inst/doc/RaceID.Rmd
8d20a7beccf593db181f84309dfa1603 *inst/doc/RaceID.html
6036b6e04c8e78efa59da1c0b5079487 *man/CCcorrect.Rd
c9aefa9c773ddb9c8f80e4902821abe2 *man/Ltree.Rd
dc5d0689b0db4c342c4f6552625e42b9 *man/RaceID-package.Rd
b09d3e5e3c077864f83e26f79f397958 *man/SCseq.Rd
4e5f04b2546cf9cab693354e5b444b18 *man/Seurat2SCseq.Rd
a2ffb988328ac074033287766e901f36 *man/barplotgene.Rd
61ce20498417ac09645f9647f1d3b0c9 *man/baseLineVar.Rd
f7d911afc6ad6f40ddae9bea60c12f29 *man/branchcells.Rd
8845c15e6aaef128e02bd1b8c9c8a1b3 *man/calcAlphaG.Rd
b0557591adb71f589ec1f4b2c198349b *man/calcVar.Rd
b5443da625c2bde3c6e3281c1b3f61be *man/calcVarFit.Rd
8aee8582bb3f7a80fe163fe5133ec354 *man/cc_genes.Rd
b6c6a9390c1c1ae40b3feb3f621b6f34 *man/cellsfromtree.Rd
53511b90ece5c8433bd495e7691a21ec *man/cleanNN.Rd
7cd13357ba18c600943092b852e3b154 *man/clustdiffgenes.Rd
93a25cbfbb31ffd05d4054cc6ce02859 *man/clustexp.Rd
06dac6e71578215ed542d65e296d5a1e *man/clustheatmap.Rd
7049c64a0278303287dd6720ced902b8 *man/compMean.Rd
f3e973a3823c14f0ca631e4aa4cb3ddb *man/compNoise.Rd
87d9d06f25a9ce3a4410fa2221fdacde *man/compTBNoise.Rd
cec86e47bdd95ce011985611716f1240 *man/compdist.Rd
794b3a9e5f6ab15209862ab905596e5c *man/compentropy.Rd
61d96c7f6f92efdf0e4291494af2368c *man/compfr.Rd
1c68990a914222ce9388a1c7feb6ce95 *man/compmedoids.Rd
cf803a21bf0dec1bc7da9d750703f1c8 *man/comppvalue.Rd
2edbf2f2e21a3d24b44e51c8f1ca6811 *man/compscore.Rd
25cfba933585164996d41117e3bcfbf9 *man/comptsne.Rd
d3a147dfd3963aa58db82cf2e9f90c4c *man/compumap.Rd
7d31a0a59e565a79de5340bb48e51292 *man/corrVar.Rd
937e147ebe60c42669b62797fa4e215e *man/createKnnMatrix.Rd
687935f30f05bcd1c0f163102b44c1ca *man/diffNoisyGenes.Rd
5cfec3b8040544c201de348bac3e4d5b *man/diffNoisyGenesTB.Rd
7408fe2124f3449f0efd7344beeb2a18 *man/diffexpnb.Rd
073375bcbc1e8dbc0e82be35ba448464 *man/diffgenes.Rd
597e59388a3f256c51761048403dfe0f *man/extractCounts.Rd
25affb00bdc786e59c8ecd96e6f281f8 *man/filterdata.Rd
ac4d6f945e8978a785f54e08e01c10a2 *man/findoutliers.Rd
8713988ae7b41c13351d83ebdb093bca *man/fitBackVar.Rd
6a8aa60196805f5ee110afa8959a55f6 *man/fitGammaRt.Rd
f5decfc951cd3868a18ef3da04f2e3d2 *man/fitLogVarLogMean.Rd
6d403e893433d557e6c42266ed679282 *man/fitNBtb.Rd
f76f15f14a6d9dbcd80a4a7a72206022 *man/fitNBtbCl.Rd
4bdd2fcf2e22810c42f892f2e122bcdf *man/fractDotPlot.Rd
3c2459adb3952e6c386291c78b1a50f7 *man/getExpData.Rd
68e6719cda77a1c3afe641fbedb4e3ff *man/getFilteredCounts.Rd
f929b4b4f10138f55a9f17c47300c93c *man/getNode.Rd
07f1831ebc218b4414eb6a49faca2f81 *man/getfdata.Rd
9ee4f45f013bcff68091862215d8814b *man/getproj.Rd
5bf20fd02bfe57eaff157bd666ccb49d *man/graphCluster.Rd
42f39ac9797fc956c75ebf93579f4711 *man/imputeexp.Rd
408989ae1de9e666aaa2ac3dc905d536 *man/inspectKNN.Rd
16f97b9c44d0ea4b486f7204a0c14339 *man/intestinalData.Rd
6d2ea300dcc990032e2307466000a33d *man/intestinalDataSmall.Rd
9a9842ca824ebd68e6bef99aaf33d65c *man/lineagegraph.Rd
a27573e333e523a8e779f388adec32a3 *man/maxNoisyGenes.Rd
b71ef463a4af976b8c42af5a3e948873 *man/maxNoisyGenesTB.Rd
33188161a3fd8707968298b1f8130b33 *man/noiseBaseFit.Rd
366a501a1d272b0157ba4f07c8475358 *man/plotB.Rd
6de7d8dfc3487a115aa203b4dbce6443 *man/plotBackVar.Rd
733da863e515f779dc9f8387a4e56ef4 *man/plotDiffNoise.Rd
3b315026133bda9d7633f27667a09f61 *man/plotExpNoise.Rd
92398074c208141df5eddbf0e5062d4f *man/plotMV.Rd
3287258508e2f54198974e3a37180468 *man/plotNoiseModel.Rd
3ff7233362c573a99d05321462cca9d9 *man/plotPC.Rd
a110dd8a6d1fbefffb9e2e03c3844670 *man/plotPP.Rd
22546bd972ec9dec3f89c9ddc3c94f11 *man/plotPT.Rd
972a8b062b59fe82fa3668f1af189fec *man/plotPearsonRes.Rd
41632be6b818971b3fce7605ec4c3a91 *man/plotQQ.Rd
ab00b3fed3a854b40cf00c10bd0ed8c7 *man/plotQuantMap.Rd
4aebe3d979108d9fd38b8526c6fe5ebf *man/plotRegNB.Rd
ee4d81194799906c9cb6aebc0b224e28 *man/plotTrProbs.Rd
93acc72ccc79ae335ba66b9aa3ef5f46 *man/plotUMINoise.Rd
85cc3989267cc7e01e036d03ff480cc7 *man/plotbackground.Rd
5c0946b85b43b246b3ba4d59fd05ee9d *man/plotdiffgenes.Rd
adaf6b2c93788aab18e745182cccb2e6 *man/plotdiffgenesnb.Rd
0ad41edb838a0a6bd9d20b333add480f *man/plotdimsat.Rd
f468b9d5f4d56b8a7525a4503d994e9d *man/plotdistanceratio.Rd
7bd85f42754d98e0e5a9a0eaaf8ad65c *man/plotexpmap.Rd
eda589196030fe87078646c5ded3660a *man/plotfeatmap.Rd
a3117a7de2765e08c797a91a0ecdcb43 *man/plotgraph.Rd
aaf27fa7882eee07b4a41a95fa0a7b73 *man/plotjaccard.Rd
af89fc51bb203f2cf68680aeb5a50470 *man/plotlabelsmap.Rd
e888ed8e7e897de757fe99fa2749041c *man/plotlinkpv.Rd
889d5f218812b78cba9853247db06a59 *man/plotlinkscore.Rd
830ed762e1fd3e4b81a2f90112b9f2cf *man/plotmap.Rd
374f83460281eaaa9a9c1b7a5ca8b912 *man/plotmarkergenes.Rd
35bab74aa7a5b2273a547477feb21c33 *man/plotoutlierprobs.Rd
b9b34825aa03bfdbd96c3b096213f027 *man/plotsaturation.Rd
e35a401a2390ad5fb1bd9b9dc1b3d728 *man/plotsensitivity.Rd
949c95c672cca913469a673882b818d9 *man/plotsilhouette.Rd
e974e86709242e13b3d30f45b9960342 *man/plotspantree.Rd
10ef15d0818fee574e57855ef9229534 *man/plotsymbolsmap.Rd
d81d1e3b7839584a966614e8ac420514 *man/postfntb.Rd
a1bd00373fcfcf4368e3dea9ba219baf *man/priorfn.Rd
4faacadb8ee7e562d22fedd6853764e5 *man/projback.Rd
2aa48f31b7e843d83b08f32a026f2939 *man/projcells.Rd
1d4e05e2716599188b4a44f64eab9ab8 *man/projenrichment.Rd
586700a09955851c37a24bda7d0ae358 *man/pruneKnn.Rd
d5732093d5ae410e8c05edd2d45d44b3 *man/pseudoTime.Rd
ca07f8f55b8471528d702304738db1ae *man/quantKnn.Rd
736db59264020d28cb1870868cfa916b *man/rcpp_hello_world.Rd
4e0247f8e095903fe087dcda83fd9dba *man/rfcorrect.Rd
18b16813173a78a3974fc4db5d45b5e0 *man/testPrior.Rd
d08635c9d4272f345a2981c53a091747 *man/transitionProbs.Rd
92b9e305fda637ac198870daebc6454e *man/updateSC.Rd
e00d1b8d4157e3a25a671dc444bff608 *man/varRegression.Rd
49169381b10f1d1cec9e977c5ad6c3ec *man/violinMarkerPlot.Rd
daf246d2559a7df53698b1714f020b7a *src/Makevars
1b7d3271293a605ea0366413971e4672 *src/RcppExports.cpp
1f8a54a4408ba612191d749968cd263f *src/VarID.cpp
0da63b615f705aa9dfa2e91b15a0ec3a *src/rcpp_hello_world.cpp
a04ff1928d222195cbc02f217d55434a *vignettes/RaceID-unnamed-chunk-100-1.jpeg
072034ee06e5dfd3015666faa3a1d0c2 *vignettes/RaceID-unnamed-chunk-103-1.jpeg
dad45abd16ffa0bf859734c0d2081cf8 *vignettes/RaceID-unnamed-chunk-105-1.jpeg
cea678fdfa564a91012a83b3bf7a8b19 *vignettes/RaceID-unnamed-chunk-106-1.jpeg
b52946c415cd426cf153b499c69e9723 *vignettes/RaceID-unnamed-chunk-107-1.jpeg
c1fb5ffb83c3f95dc30563b8814457c3 *vignettes/RaceID-unnamed-chunk-108-1.jpeg
1bac3a1bc6a6e867f6c319d3e1f2ffef *vignettes/RaceID-unnamed-chunk-108-2.jpeg
ae648a8c8dc0521a5d9d1a149b57a5ba *vignettes/RaceID-unnamed-chunk-109-1.jpeg
aa7da4c050349735d75c9b1e72ac42bb *vignettes/RaceID-unnamed-chunk-111-1.jpeg
276f60f92175bf56d5abcb56552f0eb4 *vignettes/RaceID-unnamed-chunk-114-1.jpeg
0852989a0659d85769aff187177dd1f2 *vignettes/RaceID-unnamed-chunk-115-1.jpeg
eceeeb120e5e494781ca2abf72bcfd9d *vignettes/RaceID-unnamed-chunk-117-1.jpeg
1a3fedb0f80dd9ffc5a19ab59dff1c08 *vignettes/RaceID-unnamed-chunk-118-1.jpeg
01a87d3067045ed081c4baeab163503c *vignettes/RaceID-unnamed-chunk-12-1.jpeg
e8ee040a05607d9c9b83ae867fc01502 *vignettes/RaceID-unnamed-chunk-121-1.jpeg
55bf4e6d003f6df5f392215c99f84502 *vignettes/RaceID-unnamed-chunk-121-2.jpeg
d723d26626abb00169420e30257b7e06 *vignettes/RaceID-unnamed-chunk-122-1.jpeg
b3688676420b5894cfea33611dd449f3 *vignettes/RaceID-unnamed-chunk-122-2.jpeg
21902e450f8f8663d291fb29a3c71307 *vignettes/RaceID-unnamed-chunk-123-1.jpeg
f3557a8155b6b96e3e7b5139c621e103 *vignettes/RaceID-unnamed-chunk-123-2.jpeg
09313e840bae03f7f4c9db045db5d73f *vignettes/RaceID-unnamed-chunk-124-1.jpeg
72b2b213e1488b5e9ccee60521f87b35 *vignettes/RaceID-unnamed-chunk-125-1.jpeg
b9e5a45938700bce11692952abeff323 *vignettes/RaceID-unnamed-chunk-126-1.jpeg
cd36d225d7e640a8c77248d05db459e2 *vignettes/RaceID-unnamed-chunk-127-1.jpeg
959a21ad4a4d23f7f9e3a728cca8776d *vignettes/RaceID-unnamed-chunk-129-1.jpeg
4d1b150a52a093e4bd09c5e7a66b1f68 *vignettes/RaceID-unnamed-chunk-13-1.jpeg
f1d93a01733805f9731d08a01074bca7 *vignettes/RaceID-unnamed-chunk-130-1.jpeg
48520f219ee8aeb096186886a4f29b81 *vignettes/RaceID-unnamed-chunk-132-1.jpeg
40d8c816778bae943c061fbbe354c089 *vignettes/RaceID-unnamed-chunk-133-1.jpeg
cea8bcb31c0033f8b6af68750f80b6e9 *vignettes/RaceID-unnamed-chunk-134-1.jpeg
e63a98cda12014b01ea70337b7b6835e *vignettes/RaceID-unnamed-chunk-135-1.jpeg
054c053fecf46847abffaeb48fdc75ec *vignettes/RaceID-unnamed-chunk-138-1.jpeg
230d11449cdf9fa2e497a712936e8138 *vignettes/RaceID-unnamed-chunk-138-2.jpeg
b6e534f2fee36816f1e2fcd58495cae8 *vignettes/RaceID-unnamed-chunk-138-3.jpeg
4dd7922be841191b15c41138d955572c *vignettes/RaceID-unnamed-chunk-14-1.jpeg
6ef75fde7426ffbf51ed04a874cc741b *vignettes/RaceID-unnamed-chunk-19-1.jpeg
b7d5f51b4ff504939e938fdbe551d8fc *vignettes/RaceID-unnamed-chunk-22-1.jpeg
87d14833388bcb8054b32471755913be *vignettes/RaceID-unnamed-chunk-23-1.jpeg
aa08c8f53007a957856f25e70c10dbf3 *vignettes/RaceID-unnamed-chunk-23-2.jpeg
879b08a1ec05f7952ef9c95ddde71b8c *vignettes/RaceID-unnamed-chunk-24-1.jpeg
b6e7dc3f0a88135d966b4b5fdb3a2577 *vignettes/RaceID-unnamed-chunk-25-1.jpeg
8e2a4fdfa2f12a45de273f47be14d332 *vignettes/RaceID-unnamed-chunk-27-1.jpeg
b8dccdba1775797aaf0b881530b59b0f *vignettes/RaceID-unnamed-chunk-29-1.jpeg
1145d6e5e3d8abda2ee91da453824c04 *vignettes/RaceID-unnamed-chunk-30-1.jpeg
c16c153b2f3ba2ab745a5f8c0a805827 *vignettes/RaceID-unnamed-chunk-31-1.jpeg
aad21dd5a578aba63f6d29bda6f0afe3 *vignettes/RaceID-unnamed-chunk-38-1.jpeg
cef33cbec00bd9d99500a6d0a2b9bc0e *vignettes/RaceID-unnamed-chunk-39-1.jpeg
deb079ad17f3ca296fa5f4f28f7cf85e *vignettes/RaceID-unnamed-chunk-40-1.jpeg
19ca413cf9d99af4c1e789a75a52a0f8 *vignettes/RaceID-unnamed-chunk-41-1.jpeg
77ad7cebcd35bfab718d67fc6affc11d *vignettes/RaceID-unnamed-chunk-42-1.jpeg
92df9531e93e6691886d1a7299f859c4 *vignettes/RaceID-unnamed-chunk-43-1.jpeg
ffb1a04208f702b316ebf12c9a999429 *vignettes/RaceID-unnamed-chunk-43-2.jpeg
043a9738db259529ae66a6f12d751da2 *vignettes/RaceID-unnamed-chunk-44-1.jpeg
723e7900f6041ede7c0d2adedcfbe680 *vignettes/RaceID-unnamed-chunk-46-1.jpeg
e1564ecbc94e41f24fef970afc0098b8 *vignettes/RaceID-unnamed-chunk-50-1.jpeg
9d88aa1453075b9b6ec1e43f9a86fa94 *vignettes/RaceID-unnamed-chunk-50-2.jpeg
8fe401588ea8ccf5c1d4b104414f191e *vignettes/RaceID-unnamed-chunk-7-1.jpeg
413163d8479d5cd52ec4f26b082c7997 *vignettes/RaceID-unnamed-chunk-73-1.jpeg
7bbeec31fee3286956ee7c976cf08e0e *vignettes/RaceID-unnamed-chunk-77-1.jpeg
39ef5869f76e8e655535e4c65853f7bd *vignettes/RaceID-unnamed-chunk-78-1.jpeg
1facc8bafb71e16b4118f93a257d96eb *vignettes/RaceID-unnamed-chunk-79-1.jpeg
c27cde3380a1a8a0dc3614d20ff80f5d *vignettes/RaceID-unnamed-chunk-8-1.jpeg
ea67541ffa97af427185babbc74597f5 *vignettes/RaceID-unnamed-chunk-85-1.jpeg
2957ae0295cf4c4d77c38a90ea403095 *vignettes/RaceID-unnamed-chunk-86-1.jpeg
b74e4356172de8b60960d361eada4aa7 *vignettes/RaceID-unnamed-chunk-87-1.jpeg
ff5829def48ca685448914f7d238260b *vignettes/RaceID-unnamed-chunk-9-1.jpeg
369d0ebf6dd1b3aa052de6bfc5906fca *vignettes/RaceID-unnamed-chunk-92-1.jpeg
ef49bd3d7e3f9e930b6ddfb692d364ab *vignettes/RaceID-unnamed-chunk-94-1.jpeg
b9e5a45938700bce11692952abeff323 *vignettes/RaceID-unnamed-chunk-96-1.jpeg
12e719c6659d909b6d62c525afd7aaf2 *vignettes/RaceID-unnamed-chunk-97-1.jpeg
5c0cc41fea0bbc399f162acef4cf5e61 *vignettes/RaceID.Rmd
