Last updated on 2026-03-29 01:50:43 CET.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 1.1.4 | 15.30 | 271.50 | 286.80 | OK | |
| r-devel-linux-x86_64-debian-gcc | 1.1.4 | 12.21 | 278.16 | 290.37 | OK | |
| r-devel-linux-x86_64-fedora-clang | 1.1.4 | 24.00 | 293.39 | 317.39 | OK | |
| r-devel-linux-x86_64-fedora-gcc | 1.1.4 | 31.00 | 347.80 | 378.80 | OK | |
| r-devel-macos-arm64 | 1.1.4 | 3.00 | 44.00 | 47.00 | OK | |
| r-devel-windows-x86_64 | 1.1.4 | 23.00 | 194.00 | 217.00 | OK | |
| r-patched-linux-x86_64 | 1.1.4 | 12.13 | 329.92 | 342.05 | OK | |
| r-release-linux-x86_64 | 1.1.4 | 14.16 | 346.01 | 360.17 | OK | |
| r-release-macos-arm64 | 1.1.4 | OK | ||||
| r-release-macos-x86_64 | 1.1.4 | 11.00 | 388.00 | 399.00 | ERROR | |
| r-release-windows-x86_64 | 1.1.4 | 20.00 | 207.00 | 227.00 | OK | |
| r-oldrel-macos-arm64 | 1.1.4 | OK | ||||
| r-oldrel-macos-x86_64 | 1.1.4 | 10.00 | 382.00 | 392.00 | ERROR | |
| r-oldrel-windows-x86_64 | 1.1.4 | 24.00 | 282.00 | 306.00 | OK |
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [103s/350s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.595, system: 0.050, elapsed: 2.124 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.703, system: 0.075, elapsed: 13.181 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.218, system: 0.020, elapsed: 0.968 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 6.786, system: 0.753, elapsed: 59.258 seconds]
Computing values for grid cells...
... done. [user: 0.176, system: 0.004, elapsed: 0.212 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 19.065, system: 0.925, elapsed: 76.495 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.558, system: 0.034, elapsed: 2.507 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.672, system: 0.100, elapsed: 13.076 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.211, system: 0.014, elapsed: 0.317 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 6.892, system: 0.698, elapsed: 25.435 seconds]
Computing values for grid cells...
... done. [user: 0.175, system: 0.004, elapsed: 0.180 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 19.083, system: 0.878, elapsed: 42.331 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.515, system: 0.030, elapsed: 1.748 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.662, system: 0.078, elapsed: 16.975 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.217, system: 0.016, elapsed: 1.167 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 6.957, system: 0.840, elapsed: 135.906 seconds]
Computing values for grid cells...
... done. [user: 0.174, system: 0.003, elapsed: 0.251 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 3 4
... computing probabilities from permuted values ...
... done. [user: 1.289, system: 0.245, elapsed: 1.345 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 20.482, system: 1.250, elapsed: 158.398 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.562, system: 0.042, elapsed: 2.374 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.676, system: 0.060, elapsed: 13.092 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.222, system: 0.016, elapsed: 0.702 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 6.701, system: 0.681, elapsed: 30.797 seconds]
Computing values for grid cells...
... done. [user: 0.182, system: 0.004, elapsed: 0.192 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 15.381, system: 0.959, elapsed: 18.656 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 34.420, system: 1.790, elapsed: 66.798 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
Saving _problems/test-MAPI_Varicell-15.R
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
Expected `sd(sf::st_area(grid.var))` to equal 963339.563502512.
Differences:
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error:
! Test failures.
Execution halted
Flavor: r-release-macos-x86_64
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [102s/339s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.653, system: 0.052, elapsed: 2.071 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.621, system: 0.099, elapsed: 11.206 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.222, system: 0.017, elapsed: 0.558 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 6.639, system: 0.785, elapsed: 71.946 seconds]
Computing values for grid cells...
... done. [user: 0.167, system: 0.003, elapsed: 0.344 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 18.885, system: 0.981, elapsed: 86.920 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.568, system: 0.034, elapsed: 3.482 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.530, system: 0.061, elapsed: 17.116 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.213, system: 0.016, elapsed: 1.020 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 6.706, system: 0.857, elapsed: 135.194 seconds]
Computing values for grid cells...
... done. [user: 0.164, system: 0.003, elapsed: 0.304 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 18.730, system: 0.991, elapsed: 158.090 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.537, system: 0.027, elapsed: 2.626 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.365, system: 0.061, elapsed: 13.761 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.214, system: 0.014, elapsed: 0.620 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 7.040, system: 0.752, elapsed: 28.459 seconds]
Computing values for grid cells...
... done. [user: 0.175, system: 0.010, elapsed: 0.177 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 3 4
... computing probabilities from permuted values ...
... done. [user: 1.268, system: 0.286, elapsed: 0.901 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 20.405, system: 1.189, elapsed: 47.484 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.714, system: 0.043, elapsed: 1.457 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.493, system: 0.079, elapsed: 11.031 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.221, system: 0.017, elapsed: 0.534 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 8.579, system: 0.823, elapsed: 8.320 seconds]
Computing values for grid cells...
... done. [user: 0.198, system: 0.003, elapsed: 0.155 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 12.372, system: 0.668, elapsed: 17.807 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 33.740, system: 1.685, elapsed: 40.010 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
Saving _problems/test-MAPI_Varicell-15.R
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
Expected `sd(sf::st_area(grid.var))` to equal 963339.563502512.
Differences:
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error:
! Test failures.
Execution halted
Flavor: r-oldrel-macos-x86_64