Last updated on 2026-02-04 02:51:44 CET.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 1.1.4 | 12.41 | 251.55 | 263.96 | OK | |
| r-devel-linux-x86_64-debian-gcc | 1.1.4 | 10.52 | 215.19 | 225.71 | OK | |
| r-devel-linux-x86_64-fedora-clang | 1.1.4 | 26.00 | 298.75 | 324.75 | OK | |
| r-devel-linux-x86_64-fedora-gcc | 1.1.4 | 28.00 | 350.39 | 378.39 | OK | |
| r-devel-windows-x86_64 | 1.1.4 | 21.00 | 198.00 | 219.00 | OK | |
| r-patched-linux-x86_64 | 1.1.4 | 14.55 | 283.39 | 297.94 | OK | |
| r-release-linux-x86_64 | 1.1.4 | 14.60 | 288.17 | 302.77 | OK | |
| r-release-macos-arm64 | 1.1.4 | OK | ||||
| r-release-macos-x86_64 | 1.1.4 | 10.00 | 632.00 | 642.00 | ERROR | |
| r-release-windows-x86_64 | 1.1.4 | 22.00 | 189.00 | 211.00 | OK | |
| r-oldrel-macos-arm64 | 1.1.4 | OK | ||||
| r-oldrel-macos-x86_64 | 1.1.4 | 11.00 | 666.00 | 677.00 | ERROR | |
| r-oldrel-windows-x86_64 | 1.1.4 | 25.00 | 239.00 | 264.00 | OK |
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [104s/580s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.547, system: 0.047, elapsed: 3.861 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.644, system: 0.102, elapsed: 15.239 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.227, system: 0.018, elapsed: 0.892 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 7.140, system: 0.753, elapsed: 26.247 seconds]
Computing values for grid cells...
... done. [user: 0.179, system: 0.007, elapsed: 0.248 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 19.316, system: 0.952, elapsed: 47.610 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.771, system: 0.080, elapsed: 2.279 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.838, system: 0.253, elapsed: 14.923 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.217, system: 0.019, elapsed: 1.000 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 6.997, system: 0.860, elapsed: 137.340 seconds]
Computing values for grid cells...
... done. [user: 0.172, system: 0.004, elapsed: 0.433 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 19.573, system: 1.246, elapsed: 156.821 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.521, system: 0.032, elapsed: 4.185 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.628, system: 0.059, elapsed: 25.829 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.315, system: 0.019, elapsed: 1.392 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 7.099, system: 0.952, elapsed: 181.811 seconds]
Computing values for grid cells...
... done. [user: 0.182, system: 0.005, elapsed: 0.471 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 3 4
... computing probabilities from permuted values ...
... done. [user: 1.282, system: 0.350, elapsed: 2.190 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 20.720, system: 1.456, elapsed: 217.576 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.590, system: 0.041, elapsed: 4.611 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.594, system: 0.089, elapsed: 24.437 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.221, system: 0.017, elapsed: 1.197 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 7.361, system: 0.871, elapsed: 91.511 seconds]
Computing values for grid cells...
... done. [user: 0.189, system: 0.005, elapsed: 0.287 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 13.356, system: 0.848, elapsed: 21.002 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 33.021, system: 1.906, elapsed: 144.577 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
Saving _problems/test-MAPI_Varicell-15.R
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
Expected `sd(sf::st_area(grid.var))` to equal 963339.563502512.
Differences:
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error:
! Test failures.
Execution halted
Flavor: r-release-macos-x86_64
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [2m/10m]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.731, system: 0.075, elapsed: 1.809 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.648, system: 0.133, elapsed: 30.577 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.219, system: 0.020, elapsed: 1.384 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 6.920, system: 0.958, elapsed: 181.832 seconds]
Computing values for grid cells...
... done. [user: 0.171, system: 0.003, elapsed: 0.474 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 19.313, system: 1.226, elapsed: 217.354 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.565, system: 0.033, elapsed: 4.626 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.645, system: 0.048, elapsed: 26.760 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.223, system: 0.016, elapsed: 1.184 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 6.880, system: 0.954, elapsed: 181.233 seconds]
Computing values for grid cells...
... done. [user: 0.165, system: 0.003, elapsed: 0.476 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 19.036, system: 1.073, elapsed: 215.717 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.550, system: 0.030, elapsed: 4.526 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.490, system: 0.052, elapsed: 24.106 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.220, system: 0.015, elapsed: 0.940 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 9.517, system: 0.889, elapsed: 26.402 seconds]
Computing values for grid cells...
... done. [user: 0.173, system: 0.005, elapsed: 0.325 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 4 3
... computing probabilities from permuted values ...
... done. [user: 1.183, system: 0.305, elapsed: 1.352 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 22.777, system: 1.322, elapsed: 59.037 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.686, system: 0.045, elapsed: 3.045 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.531, system: 0.129, elapsed: 14.346 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.213, system: 0.016, elapsed: 1.038 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 9.106, system: 0.856, elapsed: 49.812 seconds]
Computing values for grid cells...
... done. [user: 0.166, system: 0.003, elapsed: 0.175 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 11.163, system: 0.590, elapsed: 41.495 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 32.535, system: 1.669, elapsed: 111.023 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
Saving _problems/test-MAPI_Varicell-15.R
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
Expected `sd(sf::st_area(grid.var))` to equal 963339.563502512.
Differences:
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error:
! Test failures.
Execution halted
Flavor: r-oldrel-macos-x86_64