Last updated on 2025-05-14 02:50:18 CEST.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 1.0.3 | 21.67 | 259.76 | 281.43 | OK | |
| r-devel-linux-x86_64-debian-gcc | 1.0.3 | 14.13 | 182.86 | 196.99 | ERROR | |
| r-devel-linux-x86_64-fedora-clang | 1.0.3 | 435.24 | OK | |||
| r-devel-linux-x86_64-fedora-gcc | 1.0.3 | 458.78 | OK | |||
| r-devel-windows-x86_64 | 1.0.3 | 25.00 | 268.00 | 293.00 | OK | |
| r-patched-linux-x86_64 | 1.0.3 | 18.61 | 244.07 | 262.68 | OK | |
| r-release-linux-x86_64 | 1.0.3 | 20.64 | 245.88 | 266.52 | OK | |
| r-release-macos-arm64 | 1.0.3 | 144.00 | OK | |||
| r-release-macos-x86_64 | 1.0.3 | 307.00 | OK | |||
| r-release-windows-x86_64 | 1.0.3 | 23.00 | 269.00 | 292.00 | OK | |
| r-oldrel-macos-arm64 | 1.0.3 | 127.00 | OK | |||
| r-oldrel-macos-x86_64 | 1.0.3 | 195.00 | OK | |||
| r-oldrel-windows-x86_64 | 1.0.3 | 32.00 | 370.00 | 402.00 | OK |
Version: 1.0.3
Check: tests
Result: ERROR
Running ‘testthat.R’ [33s/84s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> library(testthat)
> library(missCompare)
Attaching package: 'missCompare'
The following object is masked from 'package:stats':
simulate
>
> test_check("missCompare")
[1] "random replacement imputation - in progress"
[1] "mice mixed imputation - in progress"
[1] "mi imputation - in progress"
starting worker pid=2430519 on localhost:11156 at 16:49:39.149
starting worker pid=2430521 on localhost:11156 at 16:49:39.194
[1] "missForest imputation - in progress"
[1] "Hmisc aregImpute imputation - in progress"
[1] "VIM kNN imputation - in progress"
[1] "random replacement imputation - in progress"
[1] "mice mixed imputation - in progress"
[1] "mi imputation - in progress"
starting worker pid=2434236 on localhost:11156 at 16:49:45.341
starting worker pid=2434234 on localhost:11156 at 16:49:45.451
[1] "missForest imputation - in progress"
[1] "Hmisc aregImpute imputation - in progress"
[1] "VIM kNN imputation - in progress"
[1] "random replacement imputation - in progress"
[1] "Median imputation - in progress"
[1] "Mean imputation - in progress"
[1] "missMDA regularized imputation - in progress"
[1] "missMDA EM imputation - in progress"
[1] "pcaMethods PPCA imputation - in progress"
[1] "pcaMethods svdImpute imputation - in progress"
[1] "pcaMethods BPCA imputation - in progress"
[1] "pcaMethods NIPALS imputation - in progress"
[1] "pcaMethods NLPCA imputation - in progress"
[1] "mice mixed imputation - in progress"
[1] "mi imputation - in progress"
starting worker pid=2440798 on localhost:11156 at 16:49:56.381
starting worker pid=2440799 on localhost:11156 at 16:49:56.382
[1] "Amelia II imputation - in progress"
[1] "missForest imputation - in progress"
[1] "Hmisc aregImpute imputation - in progress"
[1] "VIM kNN imputation - in progress"
[1] "random replacement imputation - in progress"
[1] "Median imputation - in progress"
[1] "Mean imputation - in progress"
[1] "missMDA regularized imputation - in progress"
[1] "missMDA EM imputation - in progress"
[1] "pcaMethods PPCA imputation - in progress"
[1] "pcaMethods svdImpute imputation - in progress"
[1] "pcaMethods BPCA imputation - in progress"
[1] "pcaMethods NIPALS imputation - in progress"
[1] "pcaMethods NLPCA imputation - in progress"
[1] "mice mixed imputation - in progress"
[1] "mi imputation - in progress"
starting worker pid=2448501 on localhost:11156 at 16:50:07.007
starting worker pid=2448502 on localhost:11156 at 16:50:07.028
[1] "Amelia II imputation - in progress"
[1] "missForest imputation - in progress"
[1] "Hmisc aregImpute imputation - in progress"
[1] "VIM kNN imputation - in progress"
[1] "Median imputation - in progress"
[1] "Mean imputation - in progress"
[1] "missMDA regularized imputation - in progress"
[1] "missMDA EM imputation - in progress"
[1] "pcaMethods svdImpute imputation - in progress"
[1] "pcaMethods BPCA imputation - in progress"
[1] "pcaMethods NIPALS imputation - in progress"
[1] "VIM kNN imputation - in progress"
[1] "random replacement imputation - in progress"
[1] "ITERATION 1 OF TOTAL 1 - IN PROGRESS"
[1] "random replacement imputation - in progress"
[1] "Median imputation - in progress"
[1] "Mean imputation - in progress"
[1] "missMDA regularized imputation - in progress"
[1] "missMDA EM imputation - in progress"
[1] "pcaMethods PPCA imputation - in progress"
[1] "pcaMethods svdImpute imputation - in progress"
[1] "pcaMethods BPCA imputation - in progress"
[1] "pcaMethods NIPALS imputation - in progress"
[1] "pcaMethods NLPCA imputation - in progress"
[1] "mice mixed imputation - in progress"
[1] "mi imputation - in progress"
starting worker pid=2468908 on localhost:11156 at 16:50:38.730
starting worker pid=2468907 on localhost:11156 at 16:50:38.738
starting worker pid=2471607 on localhost:11156 at 16:50:42.781
starting worker pid=2471605 on localhost:11156 at 16:50:42.895
starting worker pid=2476346 on localhost:11156 at 16:50:50.066
starting worker pid=2476347 on localhost:11156 at 16:50:50.074
[1] "Amelia II imputation - in progress"
[1] "missForest imputation - in progress"
[1] "Hmisc aregImpute imputation - in progress"
[ FAIL 1 | WARN 1 | SKIP 0 | PASS 35 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test.imp_simulation.R:17:3'): simulation runs without errors ──────
`impute_simulated(...)` threw an error.
Message: subscript out of bounds
Class: subscriptOutOfBoundsError/error/condition
Backtrace:
▆
1. ├─base::suppressWarnings(...) at test.imp_simulation.R:17:3
2. │ └─base::withCallingHandlers(...)
3. ├─testthat::expect_error(...)
4. │ └─testthat:::quasi_capture(...)
5. │ ├─testthat (local) .capture(...)
6. │ │ └─base::withCallingHandlers(...)
7. │ └─rlang::eval_bare(quo_get_expr(.quo), quo_get_env(.quo))
8. └─missCompare::impute_simulated(...)
9. ├─base::as.data.frame(test_aregImpute(sim$Simulated_matrix, list = res))
10. └─missCompare::test_aregImpute(sim$Simulated_matrix, list = res)
11. ├─utils::capture.output(results <- lapply(list, aregImpute_imp))
12. │ └─base::withVisible(...elt(i))
13. └─base::lapply(list, aregImpute_imp)
14. └─missCompare (local) FUN(X[[i]], ...)
15. └─Hmisc::aregImpute(...)
16. └─Hmisc::areg(...)
[ FAIL 1 | WARN 1 | SKIP 0 | PASS 35 ]
Error: Test failures
Execution halted
Flavor: r-devel-linux-x86_64-debian-gcc